©2020 Biological and Chemical Oceanography Data Management Office.Proteins identified in the Inferno hydrothermal vent plume meta-proteome (replicate Av2). Only proteins identified by peptides with a protein probability >0.9 are listed.
These data are reported as Supplementary Table 4 and discussed in Mattes et al., 2013. (doi:10.1038/ismej.2013.113)
The FASTA information in the data was expanded to include the metadata when those FASTA headers were linked to GenBank.
Proteins that were identified in biological replicate AV2 that were not identified in biological replicate Av1. (GSO: Gamma Sulfur Oxidizer)
DMO notes:
Put multiple FASTA entries on separate lines
Split out one number in FASTA header for linking
Sorted by entry number
Added linkage column
Removed commas in 'consensus annotation' column (signals database to put in new column)
Reordered columns to put KEGG last -- much longer than any other column
Changed ' to P within field because system won't take unmatched quotes. Means 'prime'.
Morris, R. (2015) Proteins from Inferno hydrothermal vent plume meta-proteome - replicate Av2. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version final) Version Date 2015-12-08 [if applicable, indicate subset used]. http://lod.bco-dmo.org/id/dataset/628718 [access date]
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